Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 VENTXP5-201ENST00000523979 775 ntBASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 AL136038.3-201ENST00000561909 1096 ntBASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 KRT8P45-201ENST00000414328 1447 ntBASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.72■■□□□ 1.55
RTCBQ9Y3I0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 CKBP1-201ENST00000565489 1086 ntBASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTCBQ9Y3I0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.7■■□□□ 1.55
RTCBQ9Y3I0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RTCBQ9Y3I0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.7■■□□□ 1.55
RTCBQ9Y3I0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTCBQ9Y3I0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 EP400NL-214ENST00000641289 2402 ntBASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTCBQ9Y3I0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 AC112907.2-201ENST00000448639 330 ntBASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.68■■□□□ 1.54
RTCBQ9Y3I0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 SMG8-203ENST00000578922 2178 ntBASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms