Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 RBM17P2-201ENST00000616397 1405 ntBASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 AL354811.1-201ENST00000610286 706 ntBASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 AL356652.1-201ENST00000615962 565 ntBASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 AL161938.1-201ENST00000569833 2180 ntBASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCL1Q9Y2P8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 PGM5P4-201ENST00000421970 445 ntBASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCL1Q9Y2P8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.96■□□□□ 0.14
RCL1Q9Y2P8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RCL1Q9Y2P8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RCL1Q9Y2P8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RCL1Q9Y2P8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RCL1Q9Y2P8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 KRT16P6-202ENST00000425692 1426 ntBASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 AC087633.2-202ENST00000565166 1439 ntBASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCL1Q9Y2P8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.94■□□□□ 0.14
RCL1Q9Y2P8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms