Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK11AQ9UQ88 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 USF2-205ENST00000594064 1179 ntTSL 2 BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 AC011558.1-201ENST00000623459 338 ntBASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC30.27■■■□□ 2.44
CDK11AQ9UQ88 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
CDK11AQ9UQ88 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDK11AQ9UQ88 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC30.26■■■□□ 2.43
CDK11AQ9UQ88 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC30.26■■■□□ 2.43
CDK11AQ9UQ88 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
CDK11AQ9UQ88 AP000550.4-202ENST00000639755 178 ntBASIC30.26■■■□□ 2.43
CDK11AQ9UQ88 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDK11AQ9UQ88 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC30.26■■■□□ 2.43
CDK11AQ9UQ88 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDK11AQ9UQ88 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 ANKRD20A18P-201ENST00000359341 492 ntBASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 HOMER2P1-201ENST00000455653 964 ntBASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
CDK11AQ9UQ88 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 AL121956.5-201ENST00000625261 221 ntBASIC30.24■■■□□ 2.43
CDK11AQ9UQ88 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 NMU-205ENST00000511469 756 ntTSL 3 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
CDK11AQ9UQ88 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 CKBP1-201ENST00000565489 1086 ntBASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC30.22■■■□□ 2.43
CDK11AQ9UQ88 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CDK11AQ9UQ88 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CDK11AQ9UQ88 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms