Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.34■□□□□ 0.85
PPARGC1AQ9UBK2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.34■□□□□ 0.85
PPARGC1AQ9UBK2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPARGC1AQ9UBK2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPARGC1AQ9UBK2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPARGC1AQ9UBK2 TMEM179-206ENST00000616017 1645 ntBASIC20.34■□□□□ 0.85
PPARGC1AQ9UBK2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPARGC1AQ9UBK2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 AC133681.1-201ENST00000465482 601 ntBASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPARGC1AQ9UBK2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.33■□□□□ 0.84
PPARGC1AQ9UBK2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PPARGC1AQ9UBK2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.33■□□□□ 0.84
PPARGC1AQ9UBK2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPARGC1AQ9UBK2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.31■□□□□ 0.84
PPARGC1AQ9UBK2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 AC124016.1-201ENST00000609552 612 ntBASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 AL023875.1-201ENST00000640777 796 ntBASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPARGC1AQ9UBK2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms