Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
UBP1Q9NZI7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 POM121L13P-201ENST00000422362 380 ntBASIC19.89■□□□□ 0.77
UBP1Q9NZI7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 AC233263.1-201ENST00000578059 224 ntBASIC19.89■□□□□ 0.77
UBP1Q9NZI7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.89■□□□□ 0.77
UBP1Q9NZI7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 AP006587.1-201ENST00000534129 1502 ntBASIC19.88■□□□□ 0.77
UBP1Q9NZI7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 AC026366.1-201ENST00000488803 879 ntBASIC19.88■□□□□ 0.77
UBP1Q9NZI7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBP1Q9NZI7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 CD99P1-205ENST00000527459 561 ntBASIC19.87■□□□□ 0.77
UBP1Q9NZI7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 MIR4651-201ENST00000582622 73 ntBASIC19.87■□□□□ 0.77
UBP1Q9NZI7 AL121829.2-201ENST00000620908 328 ntBASIC19.87■□□□□ 0.77
UBP1Q9NZI7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBP1Q9NZI7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms