Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLGN3Q9NZ94 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 AC073130.3-201ENST00000624389 2278 ntBASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 AC011506.1-201ENST00000474329 610 ntBASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.13■□□□□ 0.65
NLGN3Q9NZ94 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 AC097488.1-201ENST00000507834 756 ntBASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 EGLN1P1-201ENST00000531623 762 ntBASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
NLGN3Q9NZ94 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 TSPY14P-201ENST00000303979 915 ntBASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 FEM1AP1-201ENST00000431297 1995 ntBASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NLGN3Q9NZ94 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 CRYGFP-201ENST00000418459 633 ntBASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 LIN28AP1-201ENST00000429574 405 ntBASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NLGN3Q9NZ94 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLGN3Q9NZ94 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLGN3Q9NZ94 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NLGN3Q9NZ94 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms