Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 C1QL1P1-201ENST00000568105 661 ntBASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 FAM197Y4-202ENST00000622692 608 ntBASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ECHDC1Q9NTX5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.83■■□□□ 1.4
ECHDC1Q9NTX5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 AL158047.1-201ENST00000445918 881 ntBASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ECHDC1Q9NTX5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ECHDC1Q9NTX5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms