Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CISHQ9NSE2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.87■□□□□ 0.93
CISHQ9NSE2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CISHQ9NSE2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.87■□□□□ 0.93
CISHQ9NSE2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CISHQ9NSE2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CISHQ9NSE2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.87■□□□□ 0.93
CISHQ9NSE2 KRT8P8-201ENST00000434750 1448 ntBASIC20.87■□□□□ 0.93
CISHQ9NSE2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CISHQ9NSE2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CISHQ9NSE2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CISHQ9NSE2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CISHQ9NSE2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CISHQ9NSE2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CISHQ9NSE2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 KRT16P5-201ENST00000455284 522 ntBASIC20.86■□□□□ 0.93
CISHQ9NSE2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 AC142381.4-202ENST00000563973 229 ntBASIC20.86■□□□□ 0.93
CISHQ9NSE2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 TMEM191A-211ENST00000637163 1067 ntBASIC20.86■□□□□ 0.93
CISHQ9NSE2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CISHQ9NSE2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CISHQ9NSE2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CISHQ9NSE2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.85■□□□□ 0.93
CISHQ9NSE2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 GCSHP5-201ENST00000443090 522 ntBASIC20.85■□□□□ 0.93
CISHQ9NSE2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CISHQ9NSE2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.85■□□□□ 0.93
CISHQ9NSE2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CISHQ9NSE2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.85■□□□□ 0.93
CISHQ9NSE2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CISHQ9NSE2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.85■□□□□ 0.93
CISHQ9NSE2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CISHQ9NSE2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CISHQ9NSE2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CISHQ9NSE2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CISHQ9NSE2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.84■□□□□ 0.93
CISHQ9NSE2 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.84■□□□□ 0.93
CISHQ9NSE2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.84■□□□□ 0.93
CISHQ9NSE2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.84■□□□□ 0.93
CISHQ9NSE2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.84■□□□□ 0.93
CISHQ9NSE2 FAM197Y4-202ENST00000622692 608 ntBASIC20.84■□□□□ 0.93
CISHQ9NSE2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CISHQ9NSE2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CISHQ9NSE2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CISHQ9NSE2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CISHQ9NSE2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CISHQ9NSE2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CISHQ9NSE2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CISHQ9NSE2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.83■□□□□ 0.93
CISHQ9NSE2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CISHQ9NSE2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CISHQ9NSE2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CISHQ9NSE2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CISHQ9NSE2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CISHQ9NSE2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.83■□□□□ 0.93
CISHQ9NSE2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.83■□□□□ 0.93
CISHQ9NSE2 AL158047.1-201ENST00000445918 881 ntBASIC20.83■□□□□ 0.93
CISHQ9NSE2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.83■□□□□ 0.93
CISHQ9NSE2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.83■□□□□ 0.92
CISHQ9NSE2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.83■□□□□ 0.92
CISHQ9NSE2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CISHQ9NSE2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CISHQ9NSE2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CISHQ9NSE2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CISHQ9NSE2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.82■□□□□ 0.92
CISHQ9NSE2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CISHQ9NSE2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms