Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 PHGDH-210ENST00000641115 1638 ntBASIC20.21■□□□□ 0.83
HPS4Q9NQG7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 ARMC10P1-201ENST00000313754 855 ntBASIC20.21■□□□□ 0.83
HPS4Q9NQG7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 AL590326.2-201ENST00000625139 305 ntBASIC20.21■□□□□ 0.83
HPS4Q9NQG7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HPS4Q9NQG7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 AP005242.2-201ENST00000580065 1175 ntBASIC20.2■□□□□ 0.82
HPS4Q9NQG7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HPS4Q9NQG7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.19■□□□□ 0.82
HPS4Q9NQG7 DGCR10-201ENST00000609839 495 ntBASIC20.19■□□□□ 0.82
HPS4Q9NQG7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HPS4Q9NQG7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 SMG8-203ENST00000578922 2178 ntBASIC20.18■□□□□ 0.82
HPS4Q9NQG7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 AC010203.1-204ENST00000548782 407 ntBASIC20.18■□□□□ 0.82
HPS4Q9NQG7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 AC131212.4-201ENST00000623606 975 ntBASIC20.18■□□□□ 0.82
HPS4Q9NQG7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HPS4Q9NQG7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
HPS4Q9NQG7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms