Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 GUSBP6-202ENST00000438529 1198 ntBASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 AC005829.2-201ENST00000571422 1056 ntBASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 TFP1-202ENST00000475455 1573 ntBASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 AC091874.3-201ENST00000512672 1195 ntBASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLRC4Q9NPP4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 AC092118.2-201ENST00000613495 667 ntBASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.15■□□□□ 0.98
NLRC4Q9NPP4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
NLRC4Q9NPP4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.14■□□□□ 0.98
NLRC4Q9NPP4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NLRC4Q9NPP4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NLRC4Q9NPP4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.14■□□□□ 0.98
NLRC4Q9NPP4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NLRC4Q9NPP4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 SLC29A4P1-201ENST00000398760 971 ntBASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 NCF1B-203ENST00000435988 1254 ntBASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 TSPY6P-201ENST00000448518 926 ntBASIC21.13■□□□□ 0.97
NLRC4Q9NPP4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms