Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 GCSHP5-201ENST00000443090 522 ntBASIC16.69■□□□□ 0.26
GCM1Q9NP62 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 AC142381.4-202ENST00000563973 229 ntBASIC16.69■□□□□ 0.26
GCM1Q9NP62 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
GCM1Q9NP62 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GCM1Q9NP62 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 AC124016.1-201ENST00000609552 612 ntBASIC16.68■□□□□ 0.26
GCM1Q9NP62 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.68■□□□□ 0.26
GCM1Q9NP62 AL359736.2-201ENST00000621992 437 ntBASIC16.68■□□□□ 0.26
GCM1Q9NP62 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.68■□□□□ 0.26
GCM1Q9NP62 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GCM1Q9NP62 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 KRASP1-201ENST00000407852 552 ntBASIC16.67■□□□□ 0.26
GCM1Q9NP62 AL158047.1-201ENST00000445918 881 ntBASIC16.67■□□□□ 0.26
GCM1Q9NP62 AC133681.1-201ENST00000465482 601 ntBASIC16.67■□□□□ 0.26
GCM1Q9NP62 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 FAM197Y4-202ENST00000622692 608 ntBASIC16.67■□□□□ 0.26
GCM1Q9NP62 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GCM1Q9NP62 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.67■□□□□ 0.26
GCM1Q9NP62 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GCM1Q9NP62 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.66■□□□□ 0.26
GCM1Q9NP62 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms