Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS16Q9H269 AC105036.2-201ENST00000569468 176 ntBASIC21.46■■□□□ 1.03
VPS16Q9H269 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS16Q9H269 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
VPS16Q9H269 AC073111.5-205ENST00000641717 521 ntBASIC21.46■■□□□ 1.03
VPS16Q9H269 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
VPS16Q9H269 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS16Q9H269 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
VPS16Q9H269 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS16Q9H269 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS16Q9H269 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
VPS16Q9H269 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
VPS16Q9H269 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS16Q9H269 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS16Q9H269 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
VPS16Q9H269 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS16Q9H269 LINC01465-201ENST00000408887 1940 ntBASIC21.45■■□□□ 1.02
VPS16Q9H269 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS16Q9H269 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS16Q9H269 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS16Q9H269 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS16Q9H269 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 BX276092.2-201ENST00000417668 665 ntBASIC21.45■■□□□ 1.02
VPS16Q9H269 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.45■■□□□ 1.02
VPS16Q9H269 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.45■■□□□ 1.02
VPS16Q9H269 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS16Q9H269 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS16Q9H269 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS16Q9H269 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS16Q9H269 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
VPS16Q9H269 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS16Q9H269 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS16Q9H269 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.44■■□□□ 1.02
VPS16Q9H269 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS16Q9H269 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS16Q9H269 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS16Q9H269 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS16Q9H269 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS16Q9H269 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.44■■□□□ 1.02
VPS16Q9H269 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.44■■□□□ 1.02
VPS16Q9H269 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
VPS16Q9H269 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
VPS16Q9H269 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS16Q9H269 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS16Q9H269 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS16Q9H269 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.43■■□□□ 1.02
VPS16Q9H269 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 CDCA4P2-201ENST00000441182 718 ntBASIC21.43■■□□□ 1.02
VPS16Q9H269 AF201337.1-201ENST00000520239 748 ntBASIC21.43■■□□□ 1.02
VPS16Q9H269 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
VPS16Q9H269 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS16Q9H269 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS16Q9H269 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS16Q9H269 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS16Q9H269 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VPS16Q9H269 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
VPS16Q9H269 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS16Q9H269 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.42■■□□□ 1.02
VPS16Q9H269 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.42■■□□□ 1.02
VPS16Q9H269 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS16Q9H269 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.42■■□□□ 1.02
VPS16Q9H269 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.42■■□□□ 1.02
VPS16Q9H269 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.42■■□□□ 1.02
VPS16Q9H269 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.42■■□□□ 1.02
VPS16Q9H269 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
VPS16Q9H269 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms