Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX6-2Q9C056 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 SIRPAP1-201ENST00000448467 1770 ntBASIC15.81■□□□□ 0.12
NKX6-2Q9C056 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 PKD1P1-201ENST00000458669 6805 ntBASIC15.81■□□□□ 0.12
NKX6-2Q9C056 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NKX6-2Q9C056 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 AL391005.1-201ENST00000623953 2435 ntBASIC15.8■□□□□ 0.12
NKX6-2Q9C056 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 AC010525.1-201ENST00000585559 441 ntBASIC15.8■□□□□ 0.12
NKX6-2Q9C056 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX6-2Q9C056 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 WIZP1-201ENST00000531444 2299 ntBASIC15.79■□□□□ 0.12
NKX6-2Q9C056 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms