Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AL135905.2-201ENST00000584934 1404 ntBASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRTAP4-3Q9BYR4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 AC073130.3-201ENST00000624389 2278 ntBASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 MMP23A-201ENST00000234610 1017 ntBASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 DUT-205ENST00000558813 769 ntTSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 C1QL1P1-201ENST00000568105 661 ntBASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 AP001412.1-201ENST00000608405 714 ntBASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 HLA-A-209ENST00000638375 975 ntBASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
KRTAP4-3Q9BYR4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 LBX2-AS1-202ENST00000603175 2083 ntBASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 TMEM179-206ENST00000616017 1645 ntBASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
KRTAP4-3Q9BYR4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
KRTAP4-3Q9BYR4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC6.64□□□□□ -1.35
KRTAP4-3Q9BYR4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC6.64□□□□□ -1.35
KRTAP4-3Q9BYR4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
KRTAP4-3Q9BYR4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
KRTAP4-3Q9BYR4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
KRTAP4-3Q9BYR4 GABARAPL3-202ENST00000624044 1851 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms