Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RSPO3Q9BXY4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO3Q9BXY4 ZNF815P-204ENST00000434898 1737 ntBASIC17.98■□□□□ 0.47
RSPO3Q9BXY4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO3Q9BXY4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.98■□□□□ 0.47
RSPO3Q9BXY4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO3Q9BXY4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.97■□□□□ 0.47
RSPO3Q9BXY4 AC104417.2-201ENST00000562989 1793 ntBASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 FP475955.4-201ENST00000623131 1990 ntBASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO3Q9BXY4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RSPO3Q9BXY4 AC141586.3-201ENST00000562166 1838 ntBASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 AL390719.1-204ENST00000412397 1219 ntBASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 HLA-B-256ENST00000639848 1089 ntBASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 NEFHP1-201ENST00000412845 2629 ntBASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RSPO3Q9BXY4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms