Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 TUBB8P6-201ENST00000436895 1288 ntBASIC18.67■□□□□ 0.58
NDC1Q9BTX1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 AL353708.3-201ENST00000610272 989 ntBASIC18.67■□□□□ 0.58
NDC1Q9BTX1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 AP001271.2-201ENST00000624018 1556 ntBASIC18.67■□□□□ 0.58
NDC1Q9BTX1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NDC1Q9BTX1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.66■□□□□ 0.58
NDC1Q9BTX1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 FAM197Y1-201ENST00000421178 764 ntBASIC18.66■□□□□ 0.58
NDC1Q9BTX1 AL355355.2-201ENST00000442321 338 ntBASIC18.66■□□□□ 0.58
NDC1Q9BTX1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.66■□□□□ 0.58
NDC1Q9BTX1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 KRT18P16-201ENST00000510337 1294 ntBASIC18.65■□□□□ 0.58
NDC1Q9BTX1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 AC026471.5-201ENST00000615068 467 ntBASIC18.65■□□□□ 0.58
NDC1Q9BTX1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.65■□□□□ 0.58
NDC1Q9BTX1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NDC1Q9BTX1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NDC1Q9BTX1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.64■□□□□ 0.58
NDC1Q9BTX1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NDC1Q9BTX1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 NIFKP9-201ENST00000419265 221 ntBASIC18.64■□□□□ 0.57
NDC1Q9BTX1 KSR1P1-201ENST00000446298 240 ntBASIC18.64■□□□□ 0.57
NDC1Q9BTX1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 C1QL1P1-201ENST00000568105 661 ntBASIC18.64■□□□□ 0.57
NDC1Q9BTX1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NDC1Q9BTX1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDC1Q9BTX1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDC1Q9BTX1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDC1Q9BTX1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
NDC1Q9BTX1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
NDC1Q9BTX1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDC1Q9BTX1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms