Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 HLA-G-202ENST00000376815 851 ntBASIC11.62□□□□□ -0.55
LIMD2Q9BT23 HLA-G-203ENST00000376818 1127 ntBASIC11.62□□□□□ -0.55
LIMD2Q9BT23 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 GLI3-203ENST00000437480 451 ntTSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 AC105020.6-201ENST00000621523 1217 ntBASIC11.62□□□□□ -0.55
LIMD2Q9BT23 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LIMD2Q9BT23 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 DUX4L16-201ENST00000555130 1264 ntBASIC11.61□□□□□ -0.55
LIMD2Q9BT23 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 PARP1-210ENST00000629232 477 ntTSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LIMD2Q9BT23 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 KRT16P6-202ENST00000425692 1426 ntBASIC11.6□□□□□ -0.55
LIMD2Q9BT23 AC068338.2-201ENST00000563278 1430 ntBASIC11.6□□□□□ -0.55
LIMD2Q9BT23 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms