Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 AC099398.1-201ENST00000567919 2776 ntBASIC13.01□□□□□ -0.33
LITAFQ99732 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LITAFQ99732 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.01□□□□□ -0.33
LITAFQ99732 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LITAFQ99732 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC13.01□□□□□ -0.33
LITAFQ99732 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 AC120498.10-201ENST00000621827 505 ntBASIC13.01□□□□□ -0.33
LITAFQ99732 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LITAFQ99732 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.01□□□□□ -0.33
LITAFQ99732 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LITAFQ99732 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.01□□□□□ -0.33
LITAFQ99732 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LITAFQ99732 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13□□□□□ -0.33
LITAFQ99732 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
LITAFQ99732 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LITAFQ99732 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 AC008764.6-201ENST00000595909 2069 ntBASIC13□□□□□ -0.33
LITAFQ99732 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13□□□□□ -0.33
LITAFQ99732 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13□□□□□ -0.33
LITAFQ99732 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13□□□□□ -0.33
LITAFQ99732 AC091799.1-201ENST00000422823 811 ntBASIC13□□□□□ -0.33
LITAFQ99732 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13□□□□□ -0.33
LITAFQ99732 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13□□□□□ -0.33
LITAFQ99732 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13□□□□□ -0.33
LITAFQ99732 AC138907.5-202ENST00000569484 235 ntBASIC13□□□□□ -0.33
LITAFQ99732 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LITAFQ99732 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13□□□□□ -0.33
LITAFQ99732 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LITAFQ99732 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LITAFQ99732 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LITAFQ99732 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.99□□□□□ -0.33
LITAFQ99732 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
LITAFQ99732 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 PTMA-205ENST00000410064 814 ntTSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 AC009299.2-201ENST00000482477 511 ntBASIC12.99□□□□□ -0.33
LITAFQ99732 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LITAFQ99732 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LITAFQ99732 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LITAFQ99732 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
LITAFQ99732 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms