Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.93■□□□□ 0.46
TIMP4Q99727 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.93■□□□□ 0.46
TIMP4Q99727 AL121906.2-201ENST00000621597 723 ntBASIC17.93■□□□□ 0.46
TIMP4Q99727 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.93■□□□□ 0.46
TIMP4Q99727 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TIMP4Q99727 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TIMP4Q99727 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TIMP4Q99727 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP4Q99727 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TIMP4Q99727 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 TREX1-205ENST00000625293 1783 ntBASIC17.92■□□□□ 0.46
TIMP4Q99727 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TIMP4Q99727 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMP4Q99727 TMEM179-206ENST00000616017 1645 ntBASIC17.92■□□□□ 0.46
TIMP4Q99727 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TIMP4Q99727 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMP4Q99727 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMP4Q99727 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMP4Q99727 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMP4Q99727 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMP4Q99727 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.92■□□□□ 0.46
TIMP4Q99727 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.92■□□□□ 0.46
TIMP4Q99727 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMP4Q99727 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMP4Q99727 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP4Q99727 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TIMP4Q99727 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP4Q99727 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP4Q99727 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 RPS2P55-201ENST00000397318 883 ntBASIC17.91■□□□□ 0.46
TIMP4Q99727 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TIMP4Q99727 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP4Q99727 AC107956.1-201ENST00000494359 873 ntBASIC17.91■□□□□ 0.46
TIMP4Q99727 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.91■□□□□ 0.46
TIMP4Q99727 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.91■□□□□ 0.46
TIMP4Q99727 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TIMP4Q99727 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.91■□□□□ 0.46
TIMP4Q99727 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP4Q99727 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.91■□□□□ 0.46
TIMP4Q99727 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.91■□□□□ 0.46
TIMP4Q99727 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.91■□□□□ 0.46
TIMP4Q99727 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TIMP4Q99727 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TIMP4Q99727 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 BX119927.1-201ENST00000636596 1552 ntBASIC17.91■□□□□ 0.46
TIMP4Q99727 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TIMP4Q99727 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP4Q99727 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP4Q99727 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
TIMP4Q99727 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TIMP4Q99727 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.9■□□□□ 0.46
TIMP4Q99727 AC012618.2-201ENST00000428058 849 ntBASIC17.9■□□□□ 0.46
TIMP4Q99727 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.9■□□□□ 0.46
TIMP4Q99727 MIR4497-201ENST00000583208 89 ntBASIC17.9■□□□□ 0.46
TIMP4Q99727 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP4Q99727 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP4Q99727 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
TIMP4Q99727 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP4Q99727 AC093484.2-201ENST00000580996 2166 ntBASIC17.9■□□□□ 0.46
TIMP4Q99727 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP4Q99727 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms