Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NOTCH4Q99466 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.21■□□□□ 0.83
NOTCH4Q99466 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NOTCH4Q99466 AC139887.4-201ENST00000607877 719 ntBASIC20.21■□□□□ 0.83
NOTCH4Q99466 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.21■□□□□ 0.83
NOTCH4Q99466 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.21■□□□□ 0.83
NOTCH4Q99466 AC116562.4-202ENST00000641738 218 ntBASIC20.21■□□□□ 0.83
NOTCH4Q99466 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH4Q99466 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH4Q99466 AC092338.2-201ENST00000568827 1415 ntBASIC20.21■□□□□ 0.83
NOTCH4Q99466 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH4Q99466 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH4Q99466 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
NOTCH4Q99466 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.2■□□□□ 0.83
NOTCH4Q99466 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.2■□□□□ 0.83
NOTCH4Q99466 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.2■□□□□ 0.83
NOTCH4Q99466 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.2■□□□□ 0.83
NOTCH4Q99466 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.2■□□□□ 0.83
NOTCH4Q99466 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 AP003041.3-201ENST00000527151 707 ntBASIC20.2■□□□□ 0.82
NOTCH4Q99466 LINC01238-205ENST00000567549 1107 ntBASIC20.2■□□□□ 0.82
NOTCH4Q99466 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH4Q99466 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.2■□□□□ 0.82
NOTCH4Q99466 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 RNF152P1-201ENST00000397754 604 ntBASIC20.19■□□□□ 0.82
NOTCH4Q99466 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 AL353719.1-201ENST00000566847 864 ntBASIC20.19■□□□□ 0.82
NOTCH4Q99466 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 SLC25A1P2-201ENST00000430693 912 ntBASIC20.19■□□□□ 0.82
NOTCH4Q99466 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
NOTCH4Q99466 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH4Q99466 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOTCH4Q99466 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 AC007375.3-201ENST00000600936 2314 ntBASIC20.18■□□□□ 0.82
NOTCH4Q99466 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOTCH4Q99466 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOTCH4Q99466 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOTCH4Q99466 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 COX11P1-201ENST00000489116 835 ntBASIC20.18■□□□□ 0.82
NOTCH4Q99466 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NOTCH4Q99466 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOTCH4Q99466 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOTCH4Q99466 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NOTCH4Q99466 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NOTCH4Q99466 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.17■□□□□ 0.82
NOTCH4Q99466 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NOTCH4Q99466 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.17■□□□□ 0.82
NOTCH4Q99466 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NOTCH4Q99466 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.17■□□□□ 0.82
NOTCH4Q99466 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.17■□□□□ 0.82
NOTCH4Q99466 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
NOTCH4Q99466 AC011558.1-201ENST00000623459 338 ntBASIC20.17■□□□□ 0.82
NOTCH4Q99466 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NOTCH4Q99466 AL512408.1-201ENST00000569378 2000 ntBASIC20.17■□□□□ 0.82
NOTCH4Q99466 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms