Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 AC092667.1-201ENST00000434301 2586 ntBASIC19.76■□□□□ 0.75
PHOX2BQ99453 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 HMGN1P19-201ENST00000436976 333 ntBASIC19.76■□□□□ 0.75
PHOX2BQ99453 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 AC140113.3-201ENST00000605663 199 ntBASIC19.76■□□□□ 0.75
PHOX2BQ99453 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 AL031432.5-201ENST00000641059 760 ntBASIC19.76■□□□□ 0.75
PHOX2BQ99453 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHOX2BQ99453 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
PHOX2BQ99453 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 ZNF444P1-201ENST00000559497 298 ntBASIC19.75■□□□□ 0.75
PHOX2BQ99453 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHOX2BQ99453 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PHOX2BQ99453 AC010542.4-201ENST00000563151 1910 ntBASIC19.74■□□□□ 0.75
PHOX2BQ99453 FAM99A-202ENST00000538190 1989 ntBASIC19.74■□□□□ 0.75
PHOX2BQ99453 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.74■□□□□ 0.75
PHOX2BQ99453 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHOX2BQ99453 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHOX2BQ99453 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHOX2BQ99453 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.74■□□□□ 0.75
PHOX2BQ99453 CCR12P-201ENST00000446203 998 ntBASIC19.74■□□□□ 0.75
PHOX2BQ99453 AC112907.2-201ENST00000448639 330 ntBASIC19.74■□□□□ 0.75
PHOX2BQ99453 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHOX2BQ99453 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.74■□□□□ 0.75
PHOX2BQ99453 AL445675.2-201ENST00000620291 557 ntBASIC19.74■□□□□ 0.75
PHOX2BQ99453 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.74■□□□□ 0.75
PHOX2BQ99453 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHOX2BQ99453 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PHOX2BQ99453 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.74■□□□□ 0.75
PHOX2BQ99453 AC022898.2-201ENST00000616822 1312 ntBASIC19.74■□□□□ 0.75
PHOX2BQ99453 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 AC092329.2-201ENST00000598402 547 ntBASIC19.73■□□□□ 0.75
PHOX2BQ99453 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.73■□□□□ 0.75
PHOX2BQ99453 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHOX2BQ99453 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHOX2BQ99453 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms