Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 AC008403.3-201ENST00000598924 454 ntBASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 AP006587.1-201ENST00000534129 1502 ntBASIC20.73■□□□□ 0.91
PCDHB18PQ96TA0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 UNC93B5-201ENST00000530315 699 ntBASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB18PQ96TA0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 AL121829.2-201ENST00000620908 328 ntBASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB18PQ96TA0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.7■□□□□ 0.91
PCDHB18PQ96TA0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.91
PCDHB18PQ96TA0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHB18PQ96TA0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 ZNF815P-204ENST00000434898 1737 ntBASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB18PQ96TA0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms