Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HAPLN3Q96S86 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 AL158047.1-201ENST00000445918 881 ntBASIC20.24■□□□□ 0.83
HAPLN3Q96S86 UBE2SP1-201ENST00000450587 669 ntBASIC20.24■□□□□ 0.83
HAPLN3Q96S86 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 KRT8P8-201ENST00000434750 1448 ntBASIC20.24■□□□□ 0.83
HAPLN3Q96S86 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HAPLN3Q96S86 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HAPLN3Q96S86 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 TREX1-205ENST00000625293 1783 ntBASIC20.22■□□□□ 0.83
HAPLN3Q96S86 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
HAPLN3Q96S86 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HAPLN3Q96S86 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms