Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEK1Q96PY6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.15■■□□□ 1.3
NEK1Q96PY6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.14■■□□□ 1.3
NEK1Q96PY6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
NEK1Q96PY6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NEK1Q96PY6 KRT17P3-201ENST00000420566 1262 ntBASIC23.14■■□□□ 1.29
NEK1Q96PY6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.14■■□□□ 1.29
NEK1Q96PY6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NEK1Q96PY6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.14■■□□□ 1.29
NEK1Q96PY6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
NEK1Q96PY6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NEK1Q96PY6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NEK1Q96PY6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NEK1Q96PY6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
NEK1Q96PY6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NEK1Q96PY6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.13■■□□□ 1.29
NEK1Q96PY6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.13■■□□□ 1.29
NEK1Q96PY6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 ESRRAP1-201ENST00000400596 1257 ntBASIC23.13■■□□□ 1.29
NEK1Q96PY6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
NEK1Q96PY6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.13■■□□□ 1.29
NEK1Q96PY6 AC233263.1-201ENST00000578059 224 ntBASIC23.13■■□□□ 1.29
NEK1Q96PY6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.13■■□□□ 1.29
NEK1Q96PY6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NEK1Q96PY6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 AC069544.1-201ENST00000609399 999 ntBASIC23.12■■□□□ 1.29
NEK1Q96PY6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NEK1Q96PY6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
NEK1Q96PY6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.11■■□□□ 1.29
NEK1Q96PY6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.11■■□□□ 1.29
NEK1Q96PY6 KRT18P16-201ENST00000510337 1294 ntBASIC23.11■■□□□ 1.29
NEK1Q96PY6 PRKY-204ENST00000533551 1019 ntBASIC23.11■■□□□ 1.29
NEK1Q96PY6 MTDHP1-201ENST00000605323 784 ntBASIC23.11■■□□□ 1.29
NEK1Q96PY6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.11■■□□□ 1.29
NEK1Q96PY6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NEK1Q96PY6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
NEK1Q96PY6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NEK1Q96PY6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
NEK1Q96PY6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NEK1Q96PY6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NEK1Q96PY6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.1■■□□□ 1.29
NEK1Q96PY6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NEK1Q96PY6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NEK1Q96PY6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NEK1Q96PY6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.1■■□□□ 1.29
NEK1Q96PY6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.1■■□□□ 1.29
NEK1Q96PY6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
NEK1Q96PY6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.1■■□□□ 1.29
NEK1Q96PY6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.1■■□□□ 1.29
NEK1Q96PY6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.1■■□□□ 1.29
NEK1Q96PY6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.1■■□□□ 1.29
NEK1Q96PY6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms