Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CASD1Q96PB1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CASD1Q96PB1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASD1Q96PB1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.9■□□□□ 0.94
CASD1Q96PB1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.89■□□□□ 0.94
CASD1Q96PB1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CASD1Q96PB1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CASD1Q96PB1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.89■□□□□ 0.94
CASD1Q96PB1 AC073314.1-201ENST00000568729 2216 ntBASIC20.89■□□□□ 0.94
CASD1Q96PB1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CASD1Q96PB1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CASD1Q96PB1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CASD1Q96PB1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 TSPY17P-201ENST00000450329 467 ntBASIC20.89■□□□□ 0.93
CASD1Q96PB1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.89■□□□□ 0.93
CASD1Q96PB1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.89■□□□□ 0.93
CASD1Q96PB1 AL353719.1-201ENST00000566847 864 ntBASIC20.89■□□□□ 0.93
CASD1Q96PB1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.89■□□□□ 0.93
CASD1Q96PB1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CASD1Q96PB1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.89■□□□□ 0.93
CASD1Q96PB1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CASD1Q96PB1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CASD1Q96PB1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.89■□□□□ 0.93
CASD1Q96PB1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CASD1Q96PB1 KRT8P41-201ENST00000533985 1514 ntBASIC20.88■□□□□ 0.93
CASD1Q96PB1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASD1Q96PB1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CASD1Q96PB1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASD1Q96PB1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CASD1Q96PB1 RNF152P1-201ENST00000397754 604 ntBASIC20.88■□□□□ 0.93
CASD1Q96PB1 FAM8A6P-201ENST00000407496 1135 ntBASIC20.88■□□□□ 0.93
CASD1Q96PB1 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASD1Q96PB1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 YBX1P2-201ENST00000489612 999 ntBASIC20.88■□□□□ 0.93
CASD1Q96PB1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CASD1Q96PB1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASD1Q96PB1 AC007375.3-201ENST00000600936 2314 ntBASIC20.88■□□□□ 0.93
CASD1Q96PB1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CASD1Q96PB1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CASD1Q96PB1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASD1Q96PB1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CASD1Q96PB1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASD1Q96PB1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.87■□□□□ 0.93
CASD1Q96PB1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CASD1Q96PB1 LINC01238-205ENST00000567549 1107 ntBASIC20.87■□□□□ 0.93
CASD1Q96PB1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.87■□□□□ 0.93
CASD1Q96PB1 AC141257.4-201ENST00000634557 245 ntBASIC20.87■□□□□ 0.93
CASD1Q96PB1 AC136944.6-201ENST00000634818 245 ntBASIC20.87■□□□□ 0.93
CASD1Q96PB1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CASD1Q96PB1 MYC-208ENST00000641036 567 ntBASIC20.87■□□□□ 0.93
CASD1Q96PB1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASD1Q96PB1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CASD1Q96PB1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.87■□□□□ 0.93
CASD1Q96PB1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.87■□□□□ 0.93
CASD1Q96PB1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
CASD1Q96PB1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CASD1Q96PB1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.86■□□□□ 0.93
CASD1Q96PB1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms