Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 AC092666.2-201ENST00000613287 246 ntBASIC20.67■□□□□ 0.9
TRIM11Q96F44 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM11Q96F44 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM11Q96F44 AC124283.5-201ENST00000624661 1809 ntBASIC20.67■□□□□ 0.9
TRIM11Q96F44 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRIM11Q96F44 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM11Q96F44 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRIM11Q96F44 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM11Q96F44 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM11Q96F44 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM11Q96F44 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM11Q96F44 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM11Q96F44 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM11Q96F44 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM11Q96F44 YBX1P10-201ENST00000444752 975 ntBASIC20.66■□□□□ 0.9
TRIM11Q96F44 AC083880.1-201ENST00000608266 535 ntBASIC20.66■□□□□ 0.9
TRIM11Q96F44 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM11Q96F44 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM11Q96F44 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
TRIM11Q96F44 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM11Q96F44 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM11Q96F44 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRIM11Q96F44 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 AP006587.1-201ENST00000534129 1502 ntBASIC20.65■□□□□ 0.9
TRIM11Q96F44 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM11Q96F44 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM11Q96F44 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 AC069152.1-201ENST00000438030 544 ntBASIC20.65■□□□□ 0.9
TRIM11Q96F44 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.65■□□□□ 0.9
TRIM11Q96F44 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM11Q96F44 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRIM11Q96F44 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM11Q96F44 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM11Q96F44 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM11Q96F44 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TRIM11Q96F44 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM11Q96F44 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM11Q96F44 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM11Q96F44 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.64■□□□□ 0.9
TRIM11Q96F44 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM11Q96F44 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRIM11Q96F44 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM11Q96F44 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM11Q96F44 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM11Q96F44 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
TRIM11Q96F44 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRIM11Q96F44 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM11Q96F44 AC098934.4-201ENST00000564127 592 ntBASIC20.64■□□□□ 0.89
TRIM11Q96F44 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM11Q96F44 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM11Q96F44 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM11Q96F44 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM11Q96F44 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM11Q96F44 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM11Q96F44 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM11Q96F44 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 AC120498.8-201ENST00000614275 531 ntBASIC20.63■□□□□ 0.89
TRIM11Q96F44 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM11Q96F44 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.63■□□□□ 0.89
TRIM11Q96F44 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM11Q96F44 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM11Q96F44 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM11Q96F44 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM11Q96F44 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms