Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 BX276092.2-201ENST00000417668 665 ntBASIC19.73■□□□□ 0.75
LRRC39Q96DD0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 AC073111.5-205ENST00000641717 521 ntBASIC19.73■□□□□ 0.75
LRRC39Q96DD0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 AC141586.3-201ENST00000562166 1838 ntBASIC19.73■□□□□ 0.75
LRRC39Q96DD0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 AL050303.2-201ENST00000619798 666 ntBASIC19.72■□□□□ 0.75
LRRC39Q96DD0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC39Q96DD0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 ZNF815P-204ENST00000434898 1737 ntBASIC19.71■□□□□ 0.75
LRRC39Q96DD0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRC39Q96DD0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 AC092437.1-201ENST00000624794 1048 ntBASIC19.7■□□□□ 0.74
LRRC39Q96DD0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC39Q96DD0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 CDCA4P2-201ENST00000441182 718 ntBASIC19.69■□□□□ 0.74
LRRC39Q96DD0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 RAP2CP1-201ENST00000605103 478 ntBASIC19.69■□□□□ 0.74
LRRC39Q96DD0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC39Q96DD0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms