Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.3■■□□□ 1
TRIM43Q96BQ3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.3■■□□□ 1
TRIM43Q96BQ3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.3■■□□□ 1
TRIM43Q96BQ3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.3■■□□□ 1
TRIM43Q96BQ3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.3■■□□□ 1
TRIM43Q96BQ3 CKBP1-201ENST00000565489 1086 ntBASIC21.3■■□□□ 1
TRIM43Q96BQ3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM43Q96BQ3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.29■■□□□ 1
TRIM43Q96BQ3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.29■■□□□ 1
TRIM43Q96BQ3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRIM43Q96BQ3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TRIM43Q96BQ3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.29■■□□□ 1
TRIM43Q96BQ3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.29■■□□□ 1
TRIM43Q96BQ3 AL160286.2-201ENST00000567150 934 ntBASIC21.29■■□□□ 1
TRIM43Q96BQ3 MIR3652-201ENST00000579335 131 ntBASIC21.29■■□□□ 1
TRIM43Q96BQ3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.29■■□□□ 1
TRIM43Q96BQ3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM43Q96BQ3 KRT8P8-201ENST00000434750 1448 ntBASIC21.29■■□□□ 1
TRIM43Q96BQ3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM43Q96BQ3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM43Q96BQ3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM43Q96BQ3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 SPDYE15P-201ENST00000424157 909 ntBASIC21.28■■□□□ 1
TRIM43Q96BQ3 PRELID1P1-202ENST00000567272 903 ntBASIC21.28■■□□□ 1
TRIM43Q96BQ3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM43Q96BQ3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM43Q96BQ3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM43Q96BQ3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.28■■□□□ 1
TRIM43Q96BQ3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM43Q96BQ3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM43Q96BQ3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.27■■□□□ 1
TRIM43Q96BQ3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM43Q96BQ3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM43Q96BQ3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM43Q96BQ3 AP000523.1-201ENST00000398242 1049 ntBASIC21.27■■□□□ 1
TRIM43Q96BQ3 UNC93B7-201ENST00000509439 705 ntBASIC21.27■■□□□ 1
TRIM43Q96BQ3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM43Q96BQ3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.27■■□□□ 1
TRIM43Q96BQ3 CR769767.2-201ENST00000622735 460 ntBASIC21.27■■□□□ 1
TRIM43Q96BQ3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM43Q96BQ3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM43Q96BQ3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 LINC01465-201ENST00000408887 1940 ntBASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM43Q96BQ3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM43Q96BQ3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms