Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.8■□□□□ 0.6
UBE2E3Q969T4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 AP003097.1-201ENST00000530657 1135 ntBASIC18.8■□□□□ 0.6
UBE2E3Q969T4 KRT18P6-201ENST00000555540 1265 ntBASIC18.8■□□□□ 0.6
UBE2E3Q969T4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2E3Q969T4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 KRT17P3-201ENST00000420566 1262 ntBASIC18.79■□□□□ 0.6
UBE2E3Q969T4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
UBE2E3Q969T4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 AC026366.1-201ENST00000488803 879 ntBASIC18.78■□□□□ 0.6
UBE2E3Q969T4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
UBE2E3Q969T4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBE2E3Q969T4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
UBE2E3Q969T4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBE2E3Q969T4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBE2E3Q969T4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.77■□□□□ 0.59
UBE2E3Q969T4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms