Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SMARCC1Q92922 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
SMARCC1Q92922 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SMARCC1Q92922 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC1Q92922 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.07■■□□□ 1.6
SMARCC1Q92922 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
SMARCC1Q92922 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SMARCC1Q92922 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC1Q92922 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC25.07■■□□□ 1.6
SMARCC1Q92922 KRT18P38-201ENST00000449496 1282 ntBASIC25.07■■□□□ 1.6
SMARCC1Q92922 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC1Q92922 AL136038.3-201ENST00000561909 1096 ntBASIC25.07■■□□□ 1.6
SMARCC1Q92922 AC069148.1-201ENST00000608741 768 ntBASIC25.07■■□□□ 1.6
SMARCC1Q92922 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.07■■□□□ 1.6
SMARCC1Q92922 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
SMARCC1Q92922 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC1Q92922 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCC1Q92922 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
SMARCC1Q92922 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC25.07■■□□□ 1.6
SMARCC1Q92922 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC1Q92922 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC1Q92922 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC25.06■■□□□ 1.6
SMARCC1Q92922 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC25.06■■□□□ 1.6
SMARCC1Q92922 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC25.06■■□□□ 1.6
SMARCC1Q92922 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC25.06■■□□□ 1.6
SMARCC1Q92922 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.06■■□□□ 1.6
SMARCC1Q92922 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.06■■□□□ 1.6
SMARCC1Q92922 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.06■■□□□ 1.6
SMARCC1Q92922 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
SMARCC1Q92922 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC1Q92922 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCC1Q92922 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC25.06■■□□□ 1.6
SMARCC1Q92922 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.05■■□□□ 1.6
SMARCC1Q92922 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC25.05■■□□□ 1.6
SMARCC1Q92922 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SMARCC1Q92922 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 AP000523.1-201ENST00000398242 1049 ntBASIC25.05■■□□□ 1.6
SMARCC1Q92922 AC026396.1-201ENST00000419388 421 ntBASIC25.05■■□□□ 1.6
SMARCC1Q92922 PP7080-204ENST00000510714 601 ntTSL 3 BASIC25.05■■□□□ 1.6
SMARCC1Q92922 PTK2-216ENST00000519881 863 ntTSL 3 BASIC25.05■■□□□ 1.6
SMARCC1Q92922 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC25.05■■□□□ 1.6
SMARCC1Q92922 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCC1Q92922 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.05■■□□□ 1.6
SMARCC1Q92922 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.04■■□□□ 1.6
SMARCC1Q92922 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC25.04■■□□□ 1.6
SMARCC1Q92922 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.04■■□□□ 1.6
SMARCC1Q92922 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
SMARCC1Q92922 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SMARCC1Q92922 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC25.04■■□□□ 1.6
SMARCC1Q92922 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCC1Q92922 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC25.04■■□□□ 1.6
SMARCC1Q92922 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC1Q92922 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC1Q92922 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC1Q92922 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC1Q92922 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.03■■□□□ 1.6
SMARCC1Q92922 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.03■■□□□ 1.6
SMARCC1Q92922 VENTXP5-201ENST00000523979 775 ntBASIC25.03■■□□□ 1.6
SMARCC1Q92922 CD81-212ENST00000526072 1172 ntTSL 5 BASIC25.03■■□□□ 1.6
SMARCC1Q92922 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC25.03■■□□□ 1.6
SMARCC1Q92922 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.03■■□□□ 1.6
SMARCC1Q92922 CLEC4GP1-201ENST00000596555 870 ntBASIC25.03■■□□□ 1.6
SMARCC1Q92922 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC1Q92922 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
SMARCC1Q92922 KRT8P45-201ENST00000414328 1447 ntBASIC25.03■■□□□ 1.6
SMARCC1Q92922 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC1Q92922 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC1Q92922 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC1Q92922 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC1Q92922 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC1Q92922 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC1Q92922 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC1Q92922 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC1Q92922 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC1Q92922 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
SMARCC1Q92922 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms