Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPB3Q92617 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPB3Q92617 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 KRT17P1-201ENST00000399211 1546 ntBASIC15.4■□□□□ 0.06
NPIPB3Q92617 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB3Q92617 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPIPB3Q92617 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPIPB3Q92617 LINC01465-201ENST00000408887 1940 ntBASIC15.39■□□□□ 0.05
NPIPB3Q92617 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB3Q92617 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB3Q92617 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB3Q92617 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB3Q92617 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB3Q92617 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB3Q92617 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB3Q92617 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB3Q92617 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB3Q92617 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NPIPB3Q92617 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NPIPB3Q92617 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB3Q92617 AC093787.1-201ENST00000450396 207 ntBASIC15.38■□□□□ 0.05
NPIPB3Q92617 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB3Q92617 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms