Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCHCR1Q8TD31 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 AC004408.2-201ENST00000623613 2777 ntBASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 PHGDH-210ENST00000641115 1638 ntBASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCHCR1Q8TD31 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 AC073210.2-201ENST00000430369 194 ntBASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.33■□□□□ 0.85
CCHCR1Q8TD31 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCHCR1Q8TD31 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 AC069152.1-201ENST00000438030 544 ntBASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCHCR1Q8TD31 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 DUSP5P2-201ENST00000426873 1033 ntBASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 AC097658.1-201ENST00000475555 843 ntBASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 AC023632.3-201ENST00000521633 145 ntBASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCHCR1Q8TD31 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms