Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC008040.2-201ENST00000461049 708 ntBASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 KRT8P17-201ENST00000453110 1448 ntBASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 AC116351.2-201ENST00000606540 1585 ntBASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.46■□□□□ 0.54
SNIP1Q8TAD8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SNIP1Q8TAD8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 AL359075.1-203ENST00000462729 1002 ntBASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 AL023803.3-201ENST00000615559 522 ntBASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNIP1Q8TAD8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.44■□□□□ 0.54
SNIP1Q8TAD8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 TFP1-202ENST00000475455 1573 ntBASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 GUSBP5-202ENST00000510805 1989 ntBASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNIP1Q8TAD8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNIP1Q8TAD8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms