Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMC5Q8IY18 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 AC090192.1-201ENST00000517740 490 ntBASIC24.22■■□□□ 1.47
SMC5Q8IY18 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
SMC5Q8IY18 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMC5Q8IY18 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMC5Q8IY18 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 AP006587.1-201ENST00000534129 1502 ntBASIC24.21■■□□□ 1.47
SMC5Q8IY18 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
SMC5Q8IY18 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.21■■□□□ 1.47
SMC5Q8IY18 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
SMC5Q8IY18 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.21■■□□□ 1.47
SMC5Q8IY18 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
SMC5Q8IY18 AL121829.2-201ENST00000620908 328 ntBASIC24.21■■□□□ 1.47
SMC5Q8IY18 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC24.21■■□□□ 1.47
SMC5Q8IY18 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC24.21■■□□□ 1.47
SMC5Q8IY18 AC104417.2-201ENST00000562989 1793 ntBASIC24.21■■□□□ 1.47
SMC5Q8IY18 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
SMC5Q8IY18 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SMC5Q8IY18 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
SMC5Q8IY18 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.2■■□□□ 1.47
SMC5Q8IY18 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SMC5Q8IY18 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 AC141586.3-201ENST00000562166 1838 ntBASIC24.2■■□□□ 1.46
SMC5Q8IY18 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SMC5Q8IY18 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SMC5Q8IY18 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 SOX15-203ENST00000570788 1093 ntBASIC24.2■■□□□ 1.46
SMC5Q8IY18 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SMC5Q8IY18 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SMC5Q8IY18 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SMC5Q8IY18 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SMC5Q8IY18 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SMC5Q8IY18 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
SMC5Q8IY18 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 AC008687.6-201ENST00000596318 630 ntBASIC24.19■■□□□ 1.46
SMC5Q8IY18 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC24.19■■□□□ 1.46
SMC5Q8IY18 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SMC5Q8IY18 KRT8P8-201ENST00000434750 1448 ntBASIC24.18■■□□□ 1.46
SMC5Q8IY18 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SMC5Q8IY18 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SMC5Q8IY18 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SMC5Q8IY18 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SMC5Q8IY18 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SMC5Q8IY18 KRT18P16-201ENST00000510337 1294 ntBASIC24.18■■□□□ 1.46
SMC5Q8IY18 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SMC5Q8IY18 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SMC5Q8IY18 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
SMC5Q8IY18 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms