Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.08■□□□□ 0.49
C9orf40Q8IXQ3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C9orf40Q8IXQ3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C9orf40Q8IXQ3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.08■□□□□ 0.49
C9orf40Q8IXQ3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C9orf40Q8IXQ3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C9orf40Q8IXQ3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.08■□□□□ 0.49
C9orf40Q8IXQ3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C9orf40Q8IXQ3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 NIFKP9-201ENST00000419265 221 ntBASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 AP002982.1-201ENST00000492365 877 ntBASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 AL353708.3-201ENST00000610272 989 ntBASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 AC113410.3-201ENST00000623366 203 ntBASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 AL049637.2-201ENST00000641778 930 ntBASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C9orf40Q8IXQ3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
C9orf40Q8IXQ3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 TREX1-205ENST00000625293 1783 ntBASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 HLA-A-209ENST00000638375 975 ntBASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms