Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 DUX4L16-201ENST00000555130 1264 ntBASIC21.72■■□□□ 1.07
DHX40Q8IX18 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.72■■□□□ 1.07
DHX40Q8IX18 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 BID-214ENST00000617586 542 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 AC026471.1-201ENST00000564629 3026 ntBASIC21.72■■□□□ 1.07
DHX40Q8IX18 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 AC018553.1-201ENST00000616682 1458 ntBASIC21.71■■□□□ 1.07
DHX40Q8IX18 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 C2orf69P4-201ENST00000565394 541 ntBASIC21.71■■□□□ 1.07
DHX40Q8IX18 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
DHX40Q8IX18 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
DHX40Q8IX18 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
DHX40Q8IX18 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 AC073111.5-205ENST00000641717 521 ntBASIC21.7■■□□□ 1.06
DHX40Q8IX18 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHX40Q8IX18 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.69■■□□□ 1.06
DHX40Q8IX18 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
DHX40Q8IX18 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.69■■□□□ 1.06
DHX40Q8IX18 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHX40Q8IX18 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHX40Q8IX18 KRT18P11-201ENST00000435214 1283 ntBASIC21.69■■□□□ 1.06
DHX40Q8IX18 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHX40Q8IX18 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms