Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.73■■□□□ 1.07
DHX40Q8IX18 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DHX40Q8IX18 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 DUX4L16-201ENST00000555130 1264 ntBASIC21.72■■□□□ 1.07
DHX40Q8IX18 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.72■■□□□ 1.07
DHX40Q8IX18 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 BID-214ENST00000617586 542 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DHX40Q8IX18 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.72■■□□□ 1.07
DHX40Q8IX18 AC026471.1-201ENST00000564629 3026 ntBASIC21.72■■□□□ 1.07
DHX40Q8IX18 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 AC018553.1-201ENST00000616682 1458 ntBASIC21.71■■□□□ 1.07
DHX40Q8IX18 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 C2orf69P4-201ENST00000565394 541 ntBASIC21.71■■□□□ 1.07
DHX40Q8IX18 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DHX40Q8IX18 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
DHX40Q8IX18 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
DHX40Q8IX18 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
DHX40Q8IX18 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
DHX40Q8IX18 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 AC073111.5-205ENST00000641717 521 ntBASIC21.7■■□□□ 1.06
DHX40Q8IX18 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DHX40Q8IX18 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.7■■□□□ 1.06
DHX40Q8IX18 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHX40Q8IX18 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.69■■□□□ 1.06
DHX40Q8IX18 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
DHX40Q8IX18 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.69■■□□□ 1.06
DHX40Q8IX18 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHX40Q8IX18 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHX40Q8IX18 KRT18P11-201ENST00000435214 1283 ntBASIC21.69■■□□□ 1.06
DHX40Q8IX18 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DHX40Q8IX18 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms