Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM42Q8IWZ5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 CROCCP3-202ENST00000420820 1947 ntBASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 NTF6G-201ENST00000591094 616 ntBASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM42Q8IWZ5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 HLA-G-202ENST00000376815 851 ntBASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 HLA-G-203ENST00000376818 1127 ntBASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM42Q8IWZ5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms