Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.7■□□□□ 0.42
RP1L1Q8IWN7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 AC244015.2-201ENST00000616358 1861 ntBASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.69■□□□□ 0.42
RP1L1Q8IWN7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 PLK5-205ENST00000642079 1969 ntBASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 AC026310.3-201ENST00000625186 2373 ntBASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 C1QL1P1-201ENST00000568105 661 ntBASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 FEM1AP4-201ENST00000443167 1987 ntBASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.68■□□□□ 0.42
RP1L1Q8IWN7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 MIR2861-201ENST00000636310 90 ntBASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 AC096733.2-201ENST00000609937 1394 ntBASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 AC018553.1-201ENST00000616682 1458 ntBASIC17.67■□□□□ 0.42
RP1L1Q8IWN7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 COX11P1-201ENST00000489116 835 ntBASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 AL023803.3-201ENST00000615559 522 ntBASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RP1L1Q8IWN7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms