Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC28Q86X40 AC007613.1-201ENST00000572811 2597 ntBASIC17.35■□□□□ 0.37
LRRC28Q86X40 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC28Q86X40 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC28Q86X40 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 GUSBP6-202ENST00000438529 1198 ntBASIC17.35■□□□□ 0.37
LRRC28Q86X40 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC28Q86X40 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC28Q86X40 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC28Q86X40 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC28Q86X40 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 AL355802.2-201ENST00000402069 882 ntBASIC17.34■□□□□ 0.37
LRRC28Q86X40 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 AL049812.1-201ENST00000432563 2267 ntBASIC17.34■□□□□ 0.37
LRRC28Q86X40 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 AC142086.2-201ENST00000569753 217 ntBASIC17.34■□□□□ 0.37
LRRC28Q86X40 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 AC016405.3-201ENST00000607710 860 ntBASIC17.34■□□□□ 0.37
LRRC28Q86X40 FAM21FP-204ENST00000608637 956 ntBASIC17.34■□□□□ 0.37
LRRC28Q86X40 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC28Q86X40 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC28Q86X40 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 AC138932.1-201ENST00000534164 6830 ntBASIC17.33■□□□□ 0.37
LRRC28Q86X40 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC28Q86X40 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
LRRC28Q86X40 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRC28Q86X40 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC28Q86X40 MKRN4P-201ENST00000444706 1521 ntBASIC17.33■□□□□ 0.37
LRRC28Q86X40 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC28Q86X40 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC28Q86X40 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC28Q86X40 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC28Q86X40 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC28Q86X40 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC28Q86X40 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC28Q86X40 AC116050.2-201ENST00000612102 1779 ntBASIC17.33■□□□□ 0.36
LRRC28Q86X40 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC28Q86X40 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRRC28Q86X40 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC28Q86X40 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.32■□□□□ 0.36
LRRC28Q86X40 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRC28Q86X40 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms