Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
LDB1Q86U70 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.5■□□□□ 0.71
LDB1Q86U70 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.5■□□□□ 0.71
LDB1Q86U70 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
LDB1Q86U70 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.5■□□□□ 0.71
LDB1Q86U70 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.49■□□□□ 0.71
LDB1Q86U70 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.49■□□□□ 0.71
LDB1Q86U70 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LDB1Q86U70 KRT18P6-201ENST00000555540 1265 ntBASIC19.49■□□□□ 0.71
LDB1Q86U70 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.49■□□□□ 0.71
LDB1Q86U70 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LDB1Q86U70 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LDB1Q86U70 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB1Q86U70 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
LDB1Q86U70 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LDB1Q86U70 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
LDB1Q86U70 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.48■□□□□ 0.71
LDB1Q86U70 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LDB1Q86U70 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.48■□□□□ 0.71
LDB1Q86U70 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.48■□□□□ 0.71
LDB1Q86U70 AL121906.2-201ENST00000621597 723 ntBASIC19.48■□□□□ 0.71
LDB1Q86U70 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LDB1Q86U70 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LDB1Q86U70 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.48■□□□□ 0.71
LDB1Q86U70 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDB1Q86U70 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDB1Q86U70 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDB1Q86U70 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.48■□□□□ 0.71
LDB1Q86U70 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDB1Q86U70 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.48■□□□□ 0.71
LDB1Q86U70 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDB1Q86U70 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB1Q86U70 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB1Q86U70 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.47■□□□□ 0.71
LDB1Q86U70 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.47■□□□□ 0.71
LDB1Q86U70 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB1Q86U70 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB1Q86U70 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.47■□□□□ 0.71
LDB1Q86U70 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LDB1Q86U70 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB1Q86U70 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LDB1Q86U70 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.47■□□□□ 0.71
LDB1Q86U70 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDB1Q86U70 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LDB1Q86U70 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.46■□□□□ 0.71
LDB1Q86U70 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LDB1Q86U70 AP006587.1-201ENST00000534129 1502 ntBASIC19.46■□□□□ 0.71
LDB1Q86U70 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.46■□□□□ 0.71
LDB1Q86U70 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.46■□□□□ 0.71
LDB1Q86U70 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 POM121L13P-201ENST00000422362 380 ntBASIC19.46■□□□□ 0.71
LDB1Q86U70 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.46■□□□□ 0.71
LDB1Q86U70 AC233263.1-201ENST00000578059 224 ntBASIC19.46■□□□□ 0.71
LDB1Q86U70 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms