Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 BID-203ENST00000399765 1879 ntTSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 AC006128.1-201ENST00000624704 1661 ntBASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 PCED1CP-201ENST00000419887 785 ntBASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 Z85996.1-201ENST00000494644 937 ntBASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 SPDYE13P-201ENST00000445314 798 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 AL441883.1-201ENST00000566170 1045 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 LINC01465-201ENST00000408887 1940 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 AL137060.1-201ENST00000618151 2648 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 RCC2P6-201ENST00000526625 1557 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 VENTXP5-201ENST00000523979 775 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 AC092119.3-201ENST00000612618 583 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 CR769767.2-201ENST00000622735 460 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 AC116351.2-201ENST00000606540 1585 ntBASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VPS13BQ7Z7G8 CCR12P-201ENST00000446203 998 ntBASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms