Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 AC010653.2-201ENST00000623505 997 ntBASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 AP006587.1-201ENST00000534129 1502 ntBASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 KRT8P20-201ENST00000423953 1409 ntBASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
LINC00336Q6ZUF6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 SLC25A1P4-201ENST00000567977 778 ntBASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00336Q6ZUF6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 AL138966.2-201ENST00000621997 464 ntBASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00336Q6ZUF6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 AP000692.2-201ENST00000608391 879 ntBASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00336Q6ZUF6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms