Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 CROCCP5-201ENST00000436658 830 ntBASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 AC105036.2-201ENST00000569468 176 ntBASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TMEM53Q6P2H8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.83■□□□□ 0.45
TMEM53Q6P2H8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 AL121832.2-201ENST00000610979 668 ntBASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM53Q6P2H8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 AC112907.3-201ENST00000577781 2400 ntBASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM53Q6P2H8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 AL356652.1-201ENST00000615962 565 ntBASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 AL050303.2-201ENST00000619798 666 ntBASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms