Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 PCED1CP-201ENST00000419887 785 ntBASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 AL121894.2-201ENST00000602977 491 ntBASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC29.73■■■□□ 2.35
CDC42BPAQ5VT25 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDC42BPAQ5VT25 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDC42BPAQ5VT25 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDC42BPAQ5VT25 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDC42BPAQ5VT25 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC29.73■■■□□ 2.35
CDC42BPAQ5VT25 AC011558.1-201ENST00000623459 338 ntBASIC29.73■■■□□ 2.35
CDC42BPAQ5VT25 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 AL671277.2-201ENST00000458060 996 ntBASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
CDC42BPAQ5VT25 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 CD81-212ENST00000526072 1172 ntTSL 5 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 AC069148.1-201ENST00000608741 768 ntBASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 CD37-204ENST00000535669 1674 ntTSL 2 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 LINC00565-201ENST00000562710 2331 ntBASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 ME2-216ENST00000639850 2331 ntTSL 5 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC29.71■■■□□ 2.35
CDC42BPAQ5VT25 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDC42BPAQ5VT25 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
CDC42BPAQ5VT25 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDC42BPAQ5VT25 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC29.7■■■□□ 2.34
CDC42BPAQ5VT25 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 ETFA-216ENST00000560726 942 ntTSL 3 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
CDC42BPAQ5VT25 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 AC112907.2-201ENST00000448639 330 ntBASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 KRT18P56-201ENST00000507275 550 ntBASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC29.68■■■□□ 2.34
CDC42BPAQ5VT25 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 NT5C-210ENST00000582160 860 ntTSL 2 BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
CDC42BPAQ5VT25 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDC42BPAQ5VT25 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC29.66■■■□□ 2.34
CDC42BPAQ5VT25 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC29.66■■■□□ 2.34
CDC42BPAQ5VT25 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms