Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL137013.1-201ENST00000432946 1228 ntBASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 ECEL1P2-202ENST00000465689 757 ntBASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 Z85996.1-201ENST00000494644 937 ntBASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 C2orf69P3-201ENST00000565542 1120 ntBASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RNFT1Q5M7Z0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 LINC01465-201ENST00000408887 1940 ntBASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 TSPY14P-201ENST00000303979 915 ntBASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 AC091390.4-202ENST00000476426 537 ntBASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 KRT18P35-201ENST00000510488 1269 ntBASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 EGLN1P1-201ENST00000531623 762 ntBASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 AC010203.1-204ENST00000548782 407 ntBASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 AL049597.2-201ENST00000565575 961 ntBASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNFT1Q5M7Z0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNFT1Q5M7Z0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.59■□□□□ 0.41
RNFT1Q5M7Z0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNFT1Q5M7Z0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNFT1Q5M7Z0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms