Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX4Q33E94 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX4Q33E94 AC087633.2-202ENST00000565166 1439 ntBASIC18.16■□□□□ 0.5
RFX4Q33E94 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX4Q33E94 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFX4Q33E94 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX4Q33E94 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX4Q33E94 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX4Q33E94 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX4Q33E94 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX4Q33E94 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFX4Q33E94 TERF1P5-201ENST00000477545 1207 ntBASIC18.16■□□□□ 0.5
RFX4Q33E94 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.16■□□□□ 0.5
RFX4Q33E94 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX4Q33E94 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX4Q33E94 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFX4Q33E94 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RFX4Q33E94 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX4Q33E94 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX4Q33E94 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX4Q33E94 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RFX4Q33E94 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX4Q33E94 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RFX4Q33E94 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX4Q33E94 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX4Q33E94 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX4Q33E94 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.15■□□□□ 0.5
RFX4Q33E94 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX4Q33E94 AL591742.1-201ENST00000604433 565 ntBASIC18.15■□□□□ 0.5
RFX4Q33E94 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RFX4Q33E94 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX4Q33E94 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.15■□□□□ 0.5
RFX4Q33E94 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX4Q33E94 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFX4Q33E94 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFX4Q33E94 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFX4Q33E94 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX4Q33E94 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RFX4Q33E94 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX4Q33E94 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX4Q33E94 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX4Q33E94 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX4Q33E94 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RFX4Q33E94 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RFX4Q33E94 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX4Q33E94 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.14■□□□□ 0.49
RFX4Q33E94 KRT8P17-201ENST00000453110 1448 ntBASIC18.14■□□□□ 0.49
RFX4Q33E94 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RFX4Q33E94 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX4Q33E94 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX4Q33E94 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX4Q33E94 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX4Q33E94 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX4Q33E94 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX4Q33E94 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.13■□□□□ 0.49
RFX4Q33E94 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RFX4Q33E94 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX4Q33E94 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX4Q33E94 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.13■□□□□ 0.49
RFX4Q33E94 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX4Q33E94 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX4Q33E94 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX4Q33E94 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX4Q33E94 AC010536.3-201ENST00000620306 533 ntBASIC18.13■□□□□ 0.49
RFX4Q33E94 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX4Q33E94 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RFX4Q33E94 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RFX4Q33E94 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX4Q33E94 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX4Q33E94 CYP21A1P-202ENST00000354927 1481 ntBASIC18.13■□□□□ 0.49
RFX4Q33E94 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX4Q33E94 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX4Q33E94 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX4Q33E94 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX4Q33E94 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX4Q33E94 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX4Q33E94 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.12■□□□□ 0.49
RFX4Q33E94 AC007613.1-201ENST00000572811 2597 ntBASIC18.12■□□□□ 0.49
RFX4Q33E94 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX4Q33E94 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX4Q33E94 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.12■□□□□ 0.49
RFX4Q33E94 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms