Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 KRT8P41-201ENST00000533985 1514 ntBASIC23.48■■□□□ 1.35
PDS5AQ29RF7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 KRT18P21-201ENST00000515767 1272 ntBASIC23.48■■□□□ 1.35
PDS5AQ29RF7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 AC005363.2-201ENST00000618631 242 ntBASIC23.48■■□□□ 1.35
PDS5AQ29RF7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDS5AQ29RF7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 AL391422.3-201ENST00000603791 2761 ntBASIC23.47■■□□□ 1.35
PDS5AQ29RF7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 CRYGFP-201ENST00000418459 633 ntBASIC23.47■■□□□ 1.35
PDS5AQ29RF7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 AC092865.7-201ENST00000641832 219 ntBASIC23.47■■□□□ 1.35
PDS5AQ29RF7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PDS5AQ29RF7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.46■■□□□ 1.35
PDS5AQ29RF7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 MFAP1P1-201ENST00000442257 1255 ntBASIC23.46■■□□□ 1.35
PDS5AQ29RF7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 SLC25A3P1-201ENST00000443844 931 ntBASIC23.46■■□□□ 1.35
PDS5AQ29RF7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 SLC25A1P4-201ENST00000567977 778 ntBASIC23.46■■□□□ 1.35
PDS5AQ29RF7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PDS5AQ29RF7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.45■■□□□ 1.35
PDS5AQ29RF7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.45■■□□□ 1.35
PDS5AQ29RF7 LINC01006-201ENST00000333319 2292 ntBASIC23.45■■□□□ 1.35
PDS5AQ29RF7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.35
PDS5AQ29RF7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
PDS5AQ29RF7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 AC073508.3-201ENST00000619697 1419 ntBASIC23.45■■□□□ 1.34
PDS5AQ29RF7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.45■■□□□ 1.34
PDS5AQ29RF7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PDS5AQ29RF7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms