Protein–RNA interactions for Protein: Q15825

CHRNA6, Neuronal acetylcholine receptor subunit alpha-6, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6Q15825 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA6Q15825 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.44■□□□□ 0.7
CHRNA6Q15825 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.44■□□□□ 0.7
CHRNA6Q15825 AC004264.1-201ENST00000608354 794 ntBASIC19.44■□□□□ 0.7
CHRNA6Q15825 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHRNA6Q15825 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA6Q15825 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.44■□□□□ 0.7
CHRNA6Q15825 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHRNA6Q15825 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA6Q15825 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA6Q15825 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHRNA6Q15825 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRNA6Q15825 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA6Q15825 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 KRT16P5-201ENST00000455284 522 ntBASIC19.42■□□□□ 0.7
CHRNA6Q15825 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA6Q15825 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 KRT8P8-201ENST00000434750 1448 ntBASIC19.42■□□□□ 0.7
CHRNA6Q15825 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA6Q15825 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 AP006294.2-201ENST00000641667 209 ntBASIC19.41■□□□□ 0.7
CHRNA6Q15825 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA6Q15825 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHRNA6Q15825 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA6Q15825 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA6Q15825 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRNA6Q15825 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRNA6Q15825 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHRNA6Q15825 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA6Q15825 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA6Q15825 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA6Q15825 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNA6Q15825 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHRNA6Q15825 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms