Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.68■□□□□ 0.26
EFNB3Q15768 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.68■□□□□ 0.26
EFNB3Q15768 AC131212.4-201ENST00000623606 975 ntBASIC16.68■□□□□ 0.26
EFNB3Q15768 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.68■□□□□ 0.26
EFNB3Q15768 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
EFNB3Q15768 KRT8P8-201ENST00000434750 1448 ntBASIC16.68■□□□□ 0.26
EFNB3Q15768 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EFNB3Q15768 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EFNB3Q15768 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.68■□□□□ 0.26
EFNB3Q15768 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
EFNB3Q15768 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EFNB3Q15768 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
EFNB3Q15768 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EFNB3Q15768 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EFNB3Q15768 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EFNB3Q15768 AC009237.14-201ENST00000609975 1594 ntBASIC16.68■□□□□ 0.26
EFNB3Q15768 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
EFNB3Q15768 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EFNB3Q15768 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.68■□□□□ 0.26
EFNB3Q15768 FSCN1P1-201ENST00000568912 1481 ntBASIC16.67■□□□□ 0.26
EFNB3Q15768 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
EFNB3Q15768 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.67■□□□□ 0.26
EFNB3Q15768 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
EFNB3Q15768 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
EFNB3Q15768 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.67■□□□□ 0.26
EFNB3Q15768 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.67■□□□□ 0.26
EFNB3Q15768 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.67■□□□□ 0.26
EFNB3Q15768 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.67■□□□□ 0.26
EFNB3Q15768 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
EFNB3Q15768 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
EFNB3Q15768 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
EFNB3Q15768 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.66■□□□□ 0.26
EFNB3Q15768 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EFNB3Q15768 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
EFNB3Q15768 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.66■□□□□ 0.26
EFNB3Q15768 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.66■□□□□ 0.26
EFNB3Q15768 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EFNB3Q15768 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 MMP23A-201ENST00000234610 1017 ntBASIC16.66■□□□□ 0.26
EFNB3Q15768 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 AC004980.1-204ENST00000429707 299 ntBASIC16.66■□□□□ 0.26
EFNB3Q15768 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.66■□□□□ 0.26
EFNB3Q15768 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.66■□□□□ 0.26
EFNB3Q15768 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
EFNB3Q15768 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
EFNB3Q15768 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.66■□□□□ 0.26
EFNB3Q15768 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.66■□□□□ 0.26
EFNB3Q15768 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EFNB3Q15768 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.65■□□□□ 0.26
EFNB3Q15768 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EFNB3Q15768 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.65■□□□□ 0.26
EFNB3Q15768 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 ECEL1P3-201ENST00000427961 737 ntBASIC16.65■□□□□ 0.26
EFNB3Q15768 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.65■□□□□ 0.26
EFNB3Q15768 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.65■□□□□ 0.26
EFNB3Q15768 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.65■□□□□ 0.26
EFNB3Q15768 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.65■□□□□ 0.26
EFNB3Q15768 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EFNB3Q15768 DGCR10-201ENST00000609839 495 ntBASIC16.65■□□□□ 0.26
EFNB3Q15768 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.65■□□□□ 0.26
EFNB3Q15768 HLA-A-209ENST00000638375 975 ntBASIC16.65■□□□□ 0.26
EFNB3Q15768 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.65■□□□□ 0.26
EFNB3Q15768 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms