Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.84■□□□□ 0.93
DSC1Q08554 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DSC1Q08554 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DSC1Q08554 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DSC1Q08554 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.83■□□□□ 0.93
DSC1Q08554 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
DSC1Q08554 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.83■□□□□ 0.93
DSC1Q08554 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DSC1Q08554 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.83■□□□□ 0.93
DSC1Q08554 LINC01465-201ENST00000408887 1940 ntBASIC20.83■□□□□ 0.93
DSC1Q08554 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DSC1Q08554 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DSC1Q08554 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.83■□□□□ 0.93
DSC1Q08554 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
DSC1Q08554 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
DSC1Q08554 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
DSC1Q08554 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
DSC1Q08554 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DSC1Q08554 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
DSC1Q08554 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DSC1Q08554 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
DSC1Q08554 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
DSC1Q08554 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.82■□□□□ 0.92
DSC1Q08554 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.82■□□□□ 0.92
DSC1Q08554 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
DSC1Q08554 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.82■□□□□ 0.92
DSC1Q08554 SLC25A1P2-201ENST00000430693 912 ntBASIC20.82■□□□□ 0.92
DSC1Q08554 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.82■□□□□ 0.92
DSC1Q08554 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DSC1Q08554 DUX4L26-201ENST00000489078 1255 ntBASIC20.82■□□□□ 0.92
DSC1Q08554 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.82■□□□□ 0.92
DSC1Q08554 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DSC1Q08554 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DSC1Q08554 AL391422.3-201ENST00000603791 2761 ntBASIC20.82■□□□□ 0.92
DSC1Q08554 KRT8P41-201ENST00000533985 1514 ntBASIC20.82■□□□□ 0.92
DSC1Q08554 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.82■□□□□ 0.92
DSC1Q08554 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DSC1Q08554 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DSC1Q08554 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DSC1Q08554 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.81■□□□□ 0.92
DSC1Q08554 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DSC1Q08554 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.81■□□□□ 0.92
DSC1Q08554 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DSC1Q08554 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
DSC1Q08554 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DSC1Q08554 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.81■□□□□ 0.92
DSC1Q08554 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.81■□□□□ 0.92
DSC1Q08554 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.81■□□□□ 0.92
DSC1Q08554 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DSC1Q08554 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DSC1Q08554 AC006011.2-201ENST00000621313 1158 ntBASIC20.81■□□□□ 0.92
DSC1Q08554 AC116562.4-202ENST00000641738 218 ntBASIC20.81■□□□□ 0.92
DSC1Q08554 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DSC1Q08554 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DSC1Q08554 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DSC1Q08554 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DSC1Q08554 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DSC1Q08554 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DSC1Q08554 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DSC1Q08554 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.8■□□□□ 0.92
DSC1Q08554 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.8■□□□□ 0.92
DSC1Q08554 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.8■□□□□ 0.92
DSC1Q08554 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
DSC1Q08554 AL023803.3-201ENST00000615559 522 ntBASIC20.8■□□□□ 0.92
DSC1Q08554 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.8■□□□□ 0.92
DSC1Q08554 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DSC1Q08554 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DSC1Q08554 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DSC1Q08554 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.79■□□□□ 0.92
DSC1Q08554 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DSC1Q08554 AC092338.2-201ENST00000568827 1415 ntBASIC20.79■□□□□ 0.92
DSC1Q08554 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DSC1Q08554 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DSC1Q08554 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DSC1Q08554 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DSC1Q08554 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DSC1Q08554 HMGA1P5-201ENST00000412453 271 ntBASIC20.79■□□□□ 0.92
DSC1Q08554 LIN28AP1-201ENST00000429574 405 ntBASIC20.79■□□□□ 0.92
DSC1Q08554 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DSC1Q08554 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.79■□□□□ 0.92
DSC1Q08554 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
DSC1Q08554 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.79■□□□□ 0.92
DSC1Q08554 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
DSC1Q08554 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DSC1Q08554 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.78■□□□□ 0.92
DSC1Q08554 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DSC1Q08554 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DSC1Q08554 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.78■□□□□ 0.92
DSC1Q08554 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DSC1Q08554 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms